Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927648.1_cds_XP_016475410.1_67349
CDS Infomation

[gene=LOC107797070] [db_xref=GeneID:107797070] [protein=serine carboxypeptidase-like 40] [protein_id=XP_016475410.1] [location=join(203964..204336,204653..204760,204867..205141,205236..205487,205601..205719,205842..205937,206036..206141,206240..206389)] [gbkey=CDS]
Sequence

ATGGGAAAAATCACTTTCTTCTTCCTACTTTTTACCCTCTTTTTGTCACATTTTGTTGCT
TCAAGCCTTGGAAAGAGGCAAAGTGATGTTCTTGGAAAATTTTACAAGGCTAAGCAAAAG
AAAGATTCATCCATTGACAAGAGCCAGTTTAAGGCAGCCCTTAACCATGTAGATTTAGAC
AAAGTTATTCTACCTCAAGAGGGACAGAAAGAAAAAGATTGGATCAAGAAATTGCCAGGA
CAACCACCAGTAAAATTCCAACAATATGGTGGCTATGTGACTGTCAATGAATCTGCTGGT
CGTGCCTTGTATTATTACTTTACTGAAGCTGAGAATTCCAAGTCATTGCCCCTTCTTCTT
TGGCTTAATGGAGGTCCTGGCTGTTCGTCTATTGCATTTGGAGCCATGGAGGAACTCGGA
CCTTTTAGAGTTCACAGTGATGGAAAAACATTATACAGGAATCATTATGCATGGAATCTT
GCTGCAAATGTATTGTTCTTGGAGTCTCCTGCTGGAGTAGGATTTTCTTATACAAATACA
AGCAGTGACTTCAACTCAACTGGAGATAAGAGAACAGCTAATGATAATGTTGTATTTTTA
CTGAATTGGCTCGAGCGATTTCCCGAGTACAAGAACAGAGATTTTTACATTTCTGGTGAA
AGCTATGCTGGGCATTATGTACCTCAATTGGCACATGCAATTCTTCACCTTAACAAGCGC
TCCAACAAGACTCTTATCAATCTAAAAGGAATTATCATTGGGAATGCAGTGATCAATGAA
GATACAGATAACGTAGGAATGTATGAATACTTTGCTTCTCATGCCCTAATTTCAGATCAA
ACTTTCCTTGATATCCAGAAATATTGTTACTCCGATTTCTACAACGAGGAAAAGTGCAAC
AAGGCAGGTGCAGTTTCAGACAACAATACCGATAACCTTGACATCTACAACATTTTTTTT
CCCCTGTGCCACGACGGCAATCTCACCAAACACCCTAAATTACCTTTTACATTGCAGTTT
GATCCCTGCTCCGACAATTACATTTATGCTTACTTGAATAGGCGGGATGTTCAAGAGGCA
CTCCACGCTAATGTCACCAATATCAGCTATGATTGGGAAGCTTGCAGTGATCCTCTTTTT
TACAATTGGAAAGATAGTCCGTTGACTATAATTCCTCTCCTAGAAGAGTCTTTGGCAAAT
GGTGTTCGAGTATGGATTTTTAGTGGTGATACAGATGGAAGAGTACCTGTAACTTCATCA
AAGAGATCAATAAAGGCAATGGACCTTACAGTAGACAAACCTTGGCGCTCTTGGTTGTAT
GGAGGAGAGGTTGGAGGATACATAGAAACATACAAAGGAGGACTAACATTAGCAACAGTA
AGAGGGGCAGGACATGAAGTTCCGAGTTACCAACCTGCTAGAGCCCTTTCTCTTATTTCT
CACTTCCTTTCTGGTACACCACCTCCAGGAAATGCTTAA

Peptide Sequence

PEP ID

XP_016475410.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 40 [Nicotiana tabacum]
Sequence

MGKITFFFLLFTLFLSHFVASSLGKRQSDVLGKFYKAKQKKDSSIDKSQFKAALNHVDLD
KVILPQEGQKEKDWIKKLPGQPPVKFQQYGGYVTVNESAGRALYYYFTEAENSKSLPLLL
WLNGGPGCSSIAFGAMEELGPFRVHSDGKTLYRNHYAWNLAANVLFLESPAGVGFSYTNT
SSDFNSTGDKRTANDNVVFLLNWLERFPEYKNRDFYISGESYAGHYVPQLAHAILHLNKR
SNKTLINLKGIIIGNAVINEDTDNVGMYEYFASHALISDQTFLDIQKYCYSDFYNEEKCN
KAGAVSDNNTDNLDIYNIFFPLCHDGNLTKHPKLPFTLQFDPCSDNYIYAYLNRRDVQEA
LHANVTNISYDWEACSDPLFYNWKDSPLTIIPLLEESLANGVRVWIFSGDTDGRVPVTSS
KRSIKAMDLTVDKPWRSWLYGGEVGGYIETYKGGLTLATVRGAGHEVPSYQPARALSLIS
HFLSGTPPPGNA

Transcript Sequence

Gene sequence data has not been registered.